Issues

• Question on: split.abund

  mothur/mothur.github.io#145 · Filter by author nelsoncraige opened on Sep 7, 2026

• Question on: create.database and get.oturep

  mothur/mothur.github.io#144 · Filter by author nelsoncraige opened on Sep 5, 2026

• pcr.seqs nomatch=keep is not keeping its promise ;)

  mothur/mothur.github.io#143 · Filter by author nelsoncraige opened on Jul 27, 2026
  1

• Question on agglomerating OTUs by taxonomic rank

  mothur/mothur.github.io#142 · Filter by author RiboRings opened on Apr 24, 2026
  3

• Issue with bacterial classification using Mothur v1.48.3 and SILVA v138.2

  mothur/mothur.github.io#139 · Filter by author bereya1 opened on Aug 14, 2025
  5

• count.seqs(shared=...) does not transpose a shared file but returns a count_table

  mothur/mothur.github.io#138 · Filter by author Shaunson26 opened on May 7, 2025
  3

• Question on: MiSeq SOP (follow up)

  mothur/mothur.github.io#136 · Filter by author davidalcoi opened on Mar 5, 2025
  5

• Question on: README for the SILVA v138 reference files

  mothur/mothur.github.io#135 · Filter by author mkorlevic opened on Feb 5, 2025

• Question on: Customize your reference alignment for your favorite region

  mothur/mothur.github.io#132 · Filter by author zoha234 opened on Sep 22, 2024
  1

• pcr.seqs [ERROR]

  mothur/mothur.github.io#131 · Filter by author giovannapires opened on Jul 4, 2024
  1

• Question on: RDP reference files

  mothur/mothur.github.io#130 · Filter by author jmkagle opened on Jul 2, 2024
  3

• precluster seems to complete but then no sequences in fasta?

  mothur/mothur.github.io#128 · Filter by author krmaas opened on May 11, 2024
  4

• Nanopore 16s long reads

  mothur/mothur.github.io#127 · Filter by author jemimahair opened on Apr 29, 2024
  3

• nanopore reads

  mothur/mothur.github.io#126 · Filter by author krmaas opened on Apr 23, 2024
  8

• count.seqs error if 0 read samples are part of the input file

  mothur/mothur.github.io#122 · Filter by author mikeschhorn opened on Dec 1, 2023

• Question on: unique.seqs

  mothur/mothur.github.io#121 · Filter by author rwinand opened on Sep 25, 2023

• Question on: merge.groups

  mothur/mothur.github.io#119 · Filter by author FrancoMagurno opened on Sep 1, 2023

• Question on: UNITE ITS database

  mothur/mothur.github.io#116 · Filter by author atgc1 opened on Aug 13, 2023

• Question on classify.seqs : Sequence not found in taxonomy file

  mothur/mothur.github.io#112 · Filter by author Muad-D1b opened on Jul 14, 2023

• Question on: count.seqs

  mothur/mothur.github.io#108 · Filter by author vaibhakv opened on Jun 20, 2023

• Question on: Quality File

  mothur/mothur.github.io#101 · Filter by author drdoaa233 opened on Feb 13, 2023

• Question on: merge.group

  mothur/mothur.github.io#90 · Filter by author apoosakkannu opened on Aug 4, 2022
  3

• Question on: make.biom

  mothur/mothur.github.io#87 · Filter by author emilceviruel opened on Jul 6, 2022

• Segmentation Fault during ANOSIM in mothur

  mothur/mothur.github.io#85 · Filter by author MohammadHKhan opened on May 13, 2022

• how I Split libraries according to barcodes specified

  mothur/mothur.github.io#75 · Filter by author SaraElhadidy opened on Feb 20, 2022