Skip to content

BaranziniLab/TamarindBioAgent

Repository files navigation

TamarindBioAgent

MCP adapter for Tamarind Bio-style cloud protein, structure, docking, and design workflows with guarded API calls and result provenance.

This BioRouter extension is distributed as a BRXT bundle and licensed under Apache-2.0. Use it to inspect cloud job metadata, retrieve provenance, and plan gated protein/structure/docking submissions.

Tools

  • get_tamarindbioagent_status
  • list_tamarindbioagent_api_targets
  • call_tamarindbioagent_api
  • plan_tamarindbioagent_command
  • run_tamarindbioagent_command
  • summarize_tamarindbioagent_resource

HTTP mutation methods are blocked unless the caller supplies allow_mutation=true after explicit user approval. Local command execution is disabled by default because the allowlist is empty; if commands are added later, run_tamarindbioagent_command still requires allow_execute=true.

Install

biorouter extension install tamarindbioagent.brxt

License

Apache-2.0.

About

MCP adapter for Tamarind Bio-style cloud protein, structure, docking, and design workflows with guarded API calls and result provenance.

Resources

License

Stars

Watchers

Forks

Packages

 
 
 

Contributors