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DiamondLightSource
python-murfey
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Adjust CLEM GridSquare registration logic
- #776
#776
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tieneupin
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DiamondLightSource/python-murfey:clem-gridsquare-logic
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Apr 8, 2026
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Adjust CLEM GridSquare registration logic
#776
tieneupin
merged 8 commits into
main
DiamondLightSource/python-murfey:main
from
clem-gridsquare-logic
DiamondLightSource/python-murfey:clem-gridsquare-logic
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Commits on Apr 2, 2026
Updated image size threshold for CLEM atlas to 2mm
tieneupin
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1f224ab
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Move CLEM atlas determination logic from a repeatedly used function into a computed field in the CLEM model instead
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Added logic to determine whether incoming data is for a denoised dataset of a pre-existing one, and to overwrite existing ImagingSite database entry if it is
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Switch from using 'series_name' to using 'site_name' from the CLEM Pydantic model when registering things in the databases
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Added '_Lng_LVCC' files to test dataset and added more checks to ensure that the ISPyB entries all register the denoised datasets in their final state
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Revert "Updated image size threshold for CLEM atlas to 2mm"
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Commits on Apr 7, 2026
Updated database registration logic for CLEM workflow; overwrite all fields when a denoised dataset is received in case denoised dataset is different in size from original one
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Commits on Apr 8, 2026
Spotted a typo
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