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Update FIBContext and backend logic for detecting, handling and making GIFs of drift correction images - #796

Merged

tieneupin merged 23 commits into

mainfrom

May 11, 2026

Merged

Update FIBContext and backend logic for detecting, handling and making GIFs of drift correction images#796
tieneupin merged 23 commits into
mainfrom
fib-gif-update

Commits on Apr 30, 2026
Commits on May 5, 2026
- Sanitise and verify FIB output file path
  tieneupin
  committed
  d9db531
- Change sanitisation logic
  tieneupin
  committed
  cc44ea0
- PIL.Image conditional no longer needed
  tieneupin
  committed
  316d837
- Add logic to check that 'make_gif' commands were being sent correctly after parsing FIB AutoTEM metadata
  tieneupin
  committed
  849d597
- Create a class function to determine the output directory to save processed files to for each lamella site; updated output file determination logic when creating FIB GIFs to reflect this
  tieneupin
  committed
  cf72219
- Updated tests
  tieneupin
  committed
  016f3c6
- Forgot to include most nested directory in iterative 'os.chmod' run
  tieneupin
  committed
  c9293b1
- Adjust 'mkdir' logic
  tieneupin
  committed
  94ecd0b
- Fixed broken test
  tieneupin
  committed
  b27e198
Commits on May 11, 2026