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CLEM workflow fixes #912

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Merged
tieneupin merged 11 commits into from
Oct 13, 2026
Merged

CLEM workflow fixes #912

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042bea6
Remove try-except blocks and let parent 'feedback_callback' function …
tieneupin Oct 8, 2026
f175c36
Use ISPyB registration functions directly instead of loading an entry…
tieneupin Oct 8, 2026
3e69091
Merged recent changes from 'main 'branch
tieneupin Oct 9, 2026
78144a3
Merged recent changes from 'main' branch
tieneupin Oct 9, 2026
3c98665
Merged recent changes from 'main' branch
tieneupin Oct 12, 2026
79b89eb
Merged recent changes from 'main' branch
tieneupin Oct 12, 2026
e3f43ae
Forgot to delete comment
tieneupin Oct 12, 2026
26eb184
Adjusted if-block logic to unindent code
tieneupin Oct 12, 2026
e50ad70
Fixed broken tests
tieneupin Oct 12, 2026
1073660
Include 'register' field in 'feedback_callback' error log
tieneupin Oct 12, 2026
d8fed9b
Add '# type: ignore' comment to 'from gemmi import cif' line
tieneupin Oct 12, 2026
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6 changes: 4 additions & 2 deletions src/murfey/server/feedback.py
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Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@

import mrcfile
import numpy as np
from gemmi import cif
from gemmi import cif # type: ignore
from pipeliner.project_graph import ProjectGraph
from pipeliner.star_keys import GENERAL_BLOCK, JOB_COUNTER
from sqlalchemy import func
Expand Down Expand Up @@ -2390,7 +2390,9 @@ def feedback_callback(
) # should be True
except Exception:
logger.warning(
"Exception encountered in server RabbitMQ callback", exc_info=True
"Exception encountered in server-RabbitMQ callback for workflow "
f"'{message.get('register')}'",
exc_info=True,
)
if murfey.server._transport_object:
murfey.server._transport_object.transport.nack(header, requeue=False)
Expand Down
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