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Add mzTab-M support - #193

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hechth with Copilot wants to merge 3 commits into
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copilot/support-mztab-m
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hechth with Copilot wants to merge 3 commits into
mainfrom
copilot/support-mztab-m

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Copilot AI commented Nov 9, 2026 •

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MSMetaEnhancer needs to support metabolomics workflows using mzTab-M. The new backend exposes small-molecule records for metadata enhancement.

  • Parsing and integration: Add MzTabM, reading SMH/SML rows and mapping chemical formula, name, and InChIKey fields to MSMetaEnhancer metadata keys. Route mzTab-M file formats through Application.
  • Round-trip: Fuse annotations back into the document; write new fields as optional columns while preserving row widths.
app = Application()
app.load_data("sample.mztab", file_format="mztab-m")
metadata = app.data.get_metadata()

Copilot AI linked an issue Nov 9, 2026 that may be closed by this pull request
Copilot AI and others added 2 commits November 9, 2026 15:29
Co-authored-by: hechth <12066490+hechth@users.noreply.github.com>
Co-authored-by: hechth <12066490+hechth@users.noreply.github.com>
Copilot AI changed the title [WIP] Add support for mzTab-M format in MSMetaEnhancer Add mzTab-M support Nov 9, 2026
Copilot AI requested a review from hechth November 9, 2026 15:31
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Support for mztab-m

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