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Gaussian Processes via JAX - #129
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* pending commit on MWE * tutorial works (all features, all dimensions), but it's kinda messy * want to clean up a few things, then happy to commit
* small changes to gp and _equinox modules * bug fixes * some changes to facilitate real use-cases * still want to implement dynamic selection of next sampling coordinate
* still want to change some symbol names, but works
* more coming for docs * more coming for different noise structures, too
…namespace * may break this out further later * for now, I don't want any _CF* objects getting confused with covariance kernels
* will fix later
* will want to convert formalism/gp.md to .rst eventually * (cross)linking in .md is more terse than .rst
* need to reorganize tutorial docs * reverted python 3.9 breaking changes on rebase * need to find solution for copying demos/sources from their permanent home into docs at build
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I reverted the introduction of a Sphinx addon requiring Python version >= 3.10, but that exposed another pathology: Python 3.9, 3.10, and 3.11 are deprecated by JAX and no longer receive updates, or at least they are not shown as supported by the newest version of JAX on PyPI. I figure we have a few reasonable choices:
Not sure the direction we want to go. Both of these seem reasonable with their respective tradeoffs. @akilnarayan, let me know what you think, or we can discuss this tomorrow. |
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This PR primarily adds Gaussian processes via JAX.
We'll discuss added features and features remaining to be added in our meeting.