Computational Biology and Machine Learning Group

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1. MORFEA MORFEA Public

   Extract morphodynamic IVF trajectories from timelapse EmbryoScope images

   Python

2. collagen-network-generator collagen-network-generator Public

   Generate synthetic SHG microscopy images of collagen networks

   Jupyter Notebook

3. simplicial-sindy simplicial-sindy Public

   Simplicial-SINDy infers simplicial complexes from multivariate time-series data

   Python

4. CHURP CHURP Public

   Unsupervised segmentation and identification of syllables in birdsong

   Python

5. SPINET SPINET Public

   Sheaf neural network for protein inverse folding

   Python

6. temporal-simplicial-nn temporal-simplicial-nn Public

   T-SNN: Temporal Simplicial Neural Network

   Python