Skip to content
View d33bs's full-sized avatar
🪴
Software gardening...
🪴
Software gardening...
95 followers · 271 following

Achievements

Achievement: Pull Sharkx4Achievement: StarstruckAchievement: Pair Extraordinairex4Achievement: YOLOAchievement: Quickdraw

Achievements

Achievement: Pull Sharkx4Achievement: StarstruckAchievement: Pair Extraordinairex4Achievement: YOLOAchievement: Quickdraw

Organizations

@conda-forge @cytomining @sphinx-contrib @nf-core @University-of-Colorado-Anschutz-Denver @UCBoulder @CU-DBMI @WayScience @software-gardening @xqlsystems

Block or report d33bs

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Content in all repositories owned by your account will be closed.
Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
d33bs/README.md

Hi, I'm Dave 👋

I'm a software engineer and technical leader focused on open-source data infrastructure, analytical systems, and software for complex scientific data.

I've been on Github for 13 years. During that time I've contributed to 109 repositories, opened 850 issues, performed 1573 code reviews, and have opened 1254 pull requests.

I maintain 20 Python packages on PyPI (downloaded 7,972 times last month), have 34 archived releases on Zenodo, and work I'm involved with has received 568 citations.

Pinned Loading

  1. WayScience/ome-arrow WayScience/ome-arrow Public

    Using OME specifications with Apache Arrow for fast, queryable, and language agnostic bioimage data.

    Python 8 1

  2. cytomining/CytoTable cytomining/CytoTable Public

    Harmonize high-content image analysis tool outputs for processing with Pycytominer and other Cytomining tools.

    Python 22 6

  3. cytomining/CytoDataFrame cytomining/CytoDataFrame Public

    An in-memory data analysis format for single-cell profiles alongside their corresponding images and segmentation masks.

    Python 14 3

  4. cytomining/pycytominer cytomining/pycytominer Public

    Python package for image-based profiling

    Python 145 44

  5. software-gardening/almanack software-gardening/almanack Public

    An open-source handbook of applied guidance and tools for sustainable software development and maintenance.

    Jupyter Notebook 26 6

  6. xqlsystems/duckdb-zarr xqlsystems/duckdb-zarr Public

    Query Zarr stores with SQL directly from DuckDB

    Rust 66 6