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Pull requests: ksahlin/strobealign

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Pull requests list

Enabled the piecewise path for paired-end reads
#632 opened Sep 10, 2026 by NicolasBuchin Collaborator Loading…
1
Add anchors from filtered hits to the chains after chaining feature New feature or request
#622 opened Aug 13, 2026 by NicolasBuchin Collaborator • Draft
Trim a piecewise alignment to its best-scoring segment feature New feature or request
#621 opened Aug 6, 2026 by NicolasBuchin Collaborator Loading…
1
Compute single-end MAPQ score better by considering at least two mappings.
#600 opened Jun 11, 2026 by ksahlin Owner Loading…
Add repetitive hits that are close to non-repetitive hits with a linear sweep
#590 opened Jun 4, 2026 by ksahlin Owner Loading…
3
Re-arranged commits paired extension alignment PR
#584 opened May 5, 2026 by marcelm Collaborator • Draft
2 tasks done
Perf optimizations
#566 opened Mar 3, 2026 by parlar Loading…
1
Non-canonical syncmers
#546 opened Jan 30, 2026 by marcelm Collaborator • Draft
1
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