We mostly store supplementary material here. For projects, please see the github pages of lab members and the lab web page.
Lab of microbial systems biology
We study the structure and dynamics of microbial communities with systems biology methods.
- 13 followers
- Belgium
- http://msysbiology.com/
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BTRI_mucin_study_data
BTRI_mucin_study_data PublicProcessed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
Repositories
Showing 10 of 12 repositories
- dysbiosis Public
Simulations and analyses of sequencing data for healthy and dysbiotic microbial communities
- PlasticEnz Public
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- CellScanner Public
CellScanner counts microbial species in flow cytometry data of communities separately with the help of a classifier that is trained on mono-cultures.
- PlasticDaphnia-ISMEJ Public
Effects of microplastics on Daphnia-associated microbiomes in situ and in vitro
- BTRI_mucin_study_data Public
Processed RNA-seq and fermentation data for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
- BTRI_mucin_study_scripts Public
Scripts for "Starvation response strategies of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis and their impact on co-culture dynamics".
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