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update documentations with references - #316

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HamedBabaei merged 9 commits into
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benchmark_docs
Sep 1, 2026
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HamedBabaei merged 9 commits into
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benchmark_docs

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@Krishna-Rani-t

@Krishna-Rani-t Krishna-Rani-t commented Apr 8, 2026

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Added references and performed minor cleanup for the ontology documentation pages across Agriculture, Arts and Humanities, Biology and Life Sciences, Chemistry, Ecology and Environment, Education, Events, Finance, Food and Beverage, General Knowledge, Geography, Industry, Law, Library and Cultural Heritage, Materials Science and Engineering, Medicine, News and Media, Scholarly Knowledge, Social Sciences, Units and Measurements, Upper Ontology, and Web and Internet.

Comment thread docs/source/benchmarking/agriculture/agrovoc.rst
Comment thread docs/source/benchmarking/biology_and_life_sciences/pato.rst
Comment thread docs/source/benchmarking/chemistry/chiro.rst
Comment thread docs/source/benchmarking/chemistry/chmo.rst Outdated
Available at:
`https://knowledgebase.nfdi4chem.de/knowledge_base/docs/ontology/ <https://knowledgebase.nfdi4chem.de/knowledge_base/docs/ontology/>`_

.. [#chebi-paper] Degtyarenko, K., de Matos, P., Ennis, M., Hastings, J.,

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Why chebi ontology is being cited here?

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I removed the unrelated ChEBI citation and replaced it with Degtyarenko (2003), which directly describes the FIX ontology, including its methods-and-properties structure and the relationships between them.

Comment thread docs/source/benchmarking/units_and_measurements/qudt.rst
Comment thread docs/source/benchmarking/web_and_internet/saref.rst
Comment thread docs/source/benchmarking/upper_ontology/fair.rst
Comment thread docs/source/benchmarking/upper_ontology/bfo.rst
@HamedBabaei
HamedBabaei merged commit e33ede4 into dev Sep 1, 2026
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HamedBabaei added a commit that referenced this pull request Sep 1, 2026
* Update benchmarking docs and add references

* update documentations with references

* update documentations with references

* update documentations with references

* update documentations with references

* update documentations with references

* Update ontology documentation and references

* 📝 Update ontology documentation and references

Co-authored-by: Krishna Rani <105223454+Krishna-Rani-t@users.noreply.github.com>
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