VAMPIRE (Visually Aided Morpho-Phenotyping Image Recognition) analysis quantifies and visualizes heterogeneity of cell and nucleus morphology.
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Updated
May 8, 2023 - Python
VAMPIRE (Visually Aided Morpho-Phenotyping Image Recognition) analysis quantifies and visualizes heterogeneity of cell and nucleus morphology.
Tools for geometric representation and statistical analysis of Elliptical Tubes, supporting shape deformation with applications in biomedical imaging.
What does female pelvic organ shape encode? Uterine corpus shape predicts age (R²=0.14, size-dominated, not fibroids). Ovarian/uterine shape detects endometriomas within a site, but pooled cross-validation hides a site-label confound. Inter-rater analysis shows scale-free shape is more robust than size. Code + reproducible pipeline.
How much can organ shape alone reveal? Using 1,228 whole-body CTs (16 organs, intensity discarded), we predict sex (AUC 0.87), age (MAE 9.3 yr), and show shape is near-unique per person. Hip bones carry the strongest signal. Shape outperforms intensity for sex — the signal is geometric. Code + reproducible pipeline.
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