#
ushuffle
Here are 3 public repositories matching this topic...
Multi-threaded application that searches for hairpin structures in cDNA / mRNA sequences (FASTA or GenBank) with specific consensus sequences in the loop.
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Updated
Mar 31, 2020 - Java
Perl interface to uShuffle: shuffle sequences while preserving their k-let (k-mer) counts
bioinformatics perl dna rna cpan k-mer xs ushuffle null-model sequence-shuffling dinucleotide-shuffling
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Updated
Oct 2, 2026 - Perl
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