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evomed

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kullrich / oggmap

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oggmap is a python package to extract orthologous maps (short: orthomap or in other words the evolutionary age of a given orthologous group) from OrthoFinder/eggNOG results. Oggmap results (gene ages per orthologous group) can be further used to calculate weigthed expression data (transcriptome evolutionary index) from scRNA sequencing objects.

evolution transcriptomics phylogeny single-cell-analysis phylotranscriptomics evomed
  • Updated Apr 2, 2025
  • Python

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